dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02710
Location and strand information: 7387 - 8775 (-)
Family: 4.A.1.2.6
Protein type: TC
Protein description: PTS system beta-glucoside-specific EIIBCA component

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02711
Location and strand information: 8787 - 11375 (-)
Family: GH0|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7473
Protein molecular weight: 99024.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02712
Location and strand information: 11613 - 12599 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02713
Location and strand information: 12886 - 14892 (+)
Family: 2.A.72.1.3
Protein type: TC
Protein description: Low affinity potassium transport system protein kup

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02714
Location and strand information: 15212 - 15691 (-)
Family: TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02715
Location and strand information: 15961 - 16560 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02716
Location and strand information: 16761 - 19046 (-)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 4.883
Protein molecular weight: 84631.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02717
Location and strand information: 19086 - 21827 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0443
Protein molecular weight: 104269.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02718
Location and strand information: 21974 - 23188 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004680_47|CGC1
Gene ID: MGYG000004680_02719
Location and strand information: 23177 - 24574 (-)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Isoprimeverose transporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004680_02710	PTS system beta-glucoside-specific EIIBCA component	TC	7387	8775	-	4.A.1.2.6
MGYG000004680_02711	hypothetical protein	CAZyme	8787	11375	-	GH0\| GH106
MGYG000004680_02712	HTH-type transcriptional activator RhaS	TF	11613	12599	+	HTH_AraC+HTH_AraC
MGYG000004680_02713	Low affinity potassium transport system protein kup	TC	12886	14892	+	2.A.72.1.3
MGYG000004680_02714	hypothetical protein	STP	15212	15691	-	TPR_2
MGYG000004680_02715	hypothetical protein	null	15961	16560	-	No domain
MGYG000004680_02716	Thermostable beta-glucosidase B	CAZyme	16761	19046	-	GH3
MGYG000004680_02717	hypothetical protein	CAZyme	19086	21827	-	CBM67\| GH78
MGYG000004680_02718	HTH-type transcriptional activator RhaS	TF	21974	23188	+	HTH_AraC+HTH_AraC
MGYG000004680_02719	Isoprimeverose transporter	TC	23177	24574	-	2.A.2.3.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature